Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm13884-201ENSMUST00000118103 829 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm8825-201ENSMUST00000182565 998 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm4518-201ENSMUST00000182638 718 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm6296-201ENSMUST00000222599 943 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm10553J3QPF1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm10553J3QPF1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Gm8097-201ENSMUST00000117903 829 ntBASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Gm12497-201ENSMUST00000138778 237 ntBASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Gm6376-201ENSMUST00000209407 580 ntBASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Grk6-207ENSMUST00000225925 2769 ntBASIC12.02□□□□□ -0.49
Gm10553J3QPF1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm10553J3QPF1 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Gm8655-201ENSMUST00000221159 852 ntBASIC12.01□□□□□ -0.49
Gm10553J3QPF1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm10553J3QPF1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms