Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Gm10297-201ENSMUST00000207136 651 ntBASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Gm18057-201ENSMUST00000208220 503 ntBASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Gm45525-201ENSMUST00000210800 389 ntBASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nkx1-1G3UXB3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm25287-201ENSMUST00000103846 110 ntBASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm22918-201ENSMUST00000103855 110 ntBASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm6266-201ENSMUST00000203844 806 ntBASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nkx1-1G3UXB3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 CT030185.2-201ENSMUST00000222614 1310 ntBASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Gm23984-201ENSMUST00000157139 203 ntBASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Gm38294-201ENSMUST00000192831 381 ntBASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Gm44554-201ENSMUST00000208738 147 ntBASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nkx1-1G3UXB3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Gm9682-201ENSMUST00000197505 556 ntBASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 AC121986.1-201ENSMUST00000218588 781 ntBASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 AC131743.3-201ENSMUST00000222099 662 ntBASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nkx1-1G3UXB3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.02■□□□□ 0.48
Nkx1-1G3UXB3 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms