Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Colca2F8VPY8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.85□□□□□ -0.03
Colca2F8VPY8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Gm13823-201ENSMUST00000119930 345 ntBASIC14.85□□□□□ -0.03
Colca2F8VPY8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Gm27989-201ENSMUST00000184721 107 ntBASIC14.85□□□□□ -0.03
Colca2F8VPY8 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.85□□□□□ -0.03
Colca2F8VPY8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Colca2F8VPY8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Gm13453-201ENSMUST00000118708 357 ntBASIC14.84□□□□□ -0.03
Colca2F8VPY8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Gm10499-201ENSMUST00000174094 934 ntBASIC14.84□□□□□ -0.03
Colca2F8VPY8 Gm9824-201ENSMUST00000178707 561 ntBASIC14.84□□□□□ -0.03
Colca2F8VPY8 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Gm2423-201ENSMUST00000074863 733 ntBASIC14.84□□□□□ -0.03
Colca2F8VPY8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.84□□□□□ -0.03
Colca2F8VPY8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Colca2F8VPY8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.84□□□□□ -0.03
Colca2F8VPY8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Colca2F8VPY8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Colca2F8VPY8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Colca2F8VPY8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Colca2F8VPY8 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.83□□□□□ -0.03
Colca2F8VPY8 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.83□□□□□ -0.03
Colca2F8VPY8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.83□□□□□ -0.04
Colca2F8VPY8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gm17837-201ENSMUST00000186435 985 ntBASIC14.83□□□□□ -0.04
Colca2F8VPY8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Colca2F8VPY8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms