Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Cpsf4lE9Q2N0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf4lE9Q2N0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf4lE9Q2N0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Gm8097-201ENSMUST00000117903 829 ntBASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Gm8655-201ENSMUST00000221159 852 ntBASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf4lE9Q2N0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf4lE9Q2N0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cpsf4lE9Q2N0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Cpsf4lE9Q2N0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms