Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hfm1D3Z4R1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hfm1D3Z4R1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Gm27989-201ENSMUST00000184721 107 ntBASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Gm13337-201ENSMUST00000119183 1594 ntBASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hfm1D3Z4R1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm13015-201ENSMUST00000118674 204 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm25144-201ENSMUST00000179561 110 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm25352-201ENSMUST00000179815 110 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm28630-201ENSMUST00000187806 498 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm7669-201ENSMUST00000210184 1603 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Gm6888-201ENSMUST00000221983 706 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.9■■□□□ 1.1
Hfm1D3Z4R1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
Hfm1D3Z4R1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Gm13517-201ENSMUST00000120782 1495 ntBASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC21.89■■□□□ 1.09
Hfm1D3Z4R1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Gm16026-204ENSMUST00000162652 683 ntBASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hfm1D3Z4R1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hfm1D3Z4R1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms