Protein–RNA interactions for Protein: B3F5L4

5830411N06Rik, RIKEN cDNA 5830411N06 gene, mousemouse

Predictions only

Length 1,112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5830411N06RikB3F5L4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
5830411N06RikB3F5L4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
5830411N06RikB3F5L4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Gm9682-201ENSMUST00000197505 556 ntBASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Psmb5-202ENSMUST00000227257 622 ntBASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
5830411N06RikB3F5L4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
5830411N06RikB3F5L4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
5830411N06RikB3F5L4 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
5830411N06RikB3F5L4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
5830411N06RikB3F5L4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Gm18206-201ENSMUST00000207027 926 ntBASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
5830411N06RikB3F5L4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Gm45167-201ENSMUST00000208007 322 ntBASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
5830411N06RikB3F5L4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms