Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Slc22a28B2RT89 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Slc22a28B2RT89 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Gm15565-201ENSMUST00000118890 427 ntBASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Slc22a28B2RT89 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.51□□□□□ -0.09
Slc22a28B2RT89 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Slc22a28B2RT89 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Slc22a28B2RT89 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms