Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.71□□□□□ -0.38
Chd6A3KFM7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.71□□□□□ -0.38
Chd6A3KFM7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd6A3KFM7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Chd6A3KFM7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Mir6404-201ENSMUST00000183699 94 ntBASIC12.7□□□□□ -0.38
Chd6A3KFM7 Gm18753-201ENSMUST00000201000 566 ntBASIC12.7□□□□□ -0.38
Chd6A3KFM7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.7□□□□□ -0.38
Chd6A3KFM7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Shd-206ENSMUST00000225145 998 ntBASIC12.7□□□□□ -0.38
Chd6A3KFM7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chd6A3KFM7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm13015-201ENSMUST00000118674 204 ntBASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm27892-201ENSMUST00000185017 106 ntBASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.69□□□□□ -0.38
Chd6A3KFM7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.69□□□□□ -0.38
Chd6A3KFM7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.68□□□□□ -0.38
Chd6A3KFM7 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.68□□□□□ -0.38
Chd6A3KFM7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm27533-201ENSMUST00000183800 152 ntBASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.68□□□□□ -0.38
Chd6A3KFM7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.68□□□□□ -0.38
Chd6A3KFM7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.68□□□□□ -0.38
Chd6A3KFM7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Chd6A3KFM7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms