Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn1aA2APX8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.43■□□□□ 0.22
Scn1aA2APX8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn1aA2APX8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.42■□□□□ 0.22
Scn1aA2APX8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Scn1aA2APX8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn1aA2APX8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.42■□□□□ 0.22
Scn1aA2APX8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Gm15467-201ENSMUST00000120582 445 ntBASIC16.41■□□□□ 0.22
Scn1aA2APX8 Gm25911-201ENSMUST00000157621 56 ntBASIC16.41■□□□□ 0.22
Scn1aA2APX8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Gm8318-201ENSMUST00000182954 872 ntBASIC16.41■□□□□ 0.22
Scn1aA2APX8 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.41■□□□□ 0.22
Scn1aA2APX8 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn1aA2APX8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.4■□□□□ 0.22
Scn1aA2APX8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Gm18489-201ENSMUST00000172565 551 ntBASIC16.4■□□□□ 0.22
Scn1aA2APX8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Gm7787-201ENSMUST00000216858 688 ntBASIC16.4■□□□□ 0.22
Scn1aA2APX8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.4■□□□□ 0.22
Scn1aA2APX8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn1aA2APX8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms