Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Gm12382-201ENSMUST00000122005 922 ntBASIC14.39□□□□□ -0.11
CtcflA2APF3 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Gm42545-201ENSMUST00000202755 922 ntBASIC14.39□□□□□ -0.11
CtcflA2APF3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CtcflA2APF3 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CtcflA2APF3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.38□□□□□ -0.11
CtcflA2APF3 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.38□□□□□ -0.11
CtcflA2APF3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.38□□□□□ -0.11
CtcflA2APF3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.38□□□□□ -0.11
CtcflA2APF3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CtcflA2APF3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CtcflA2APF3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.37□□□□□ -0.11
CtcflA2APF3 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.37□□□□□ -0.11
CtcflA2APF3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.37□□□□□ -0.11
CtcflA2APF3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CtcflA2APF3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CtcflA2APF3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CtcflA2APF3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.36□□□□□ -0.11
CtcflA2APF3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtcflA2APF3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.36□□□□□ -0.11
CtcflA2APF3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CtcflA2APF3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms