Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm7993-201ENSMUST00000200970 1384 ntBASIC8.22□□□□□ -1.09
Ubr4A2AN08 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm7669-201ENSMUST00000210184 1603 ntBASIC8.22□□□□□ -1.09
Ubr4A2AN08 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC8.22□□□□□ -1.09
Ubr4A2AN08 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ubr4A2AN08 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Ubr4A2AN08 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Gm5187-201ENSMUST00000117317 991 ntBASIC8.21□□□□□ -1.09
Ubr4A2AN08 Gm5940-201ENSMUST00000117582 1068 ntBASIC8.21□□□□□ -1.09
Ubr4A2AN08 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC8.21□□□□□ -1.09
Ubr4A2AN08 AC155252.1-201ENSMUST00000226462 1208 ntBASIC8.21□□□□□ -1.09
Ubr4A2AN08 Gm7399-201ENSMUST00000032395 858 ntBASIC8.21□□□□□ -1.09
Ubr4A2AN08 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC8.21□□□□□ -1.09
Ubr4A2AN08 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC8.21□□□□□ -1.1
Ubr4A2AN08 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC8.21□□□□□ -1.1
Ubr4A2AN08 Gm27701-201ENSMUST00000184498 110 ntBASIC8.21□□□□□ -1.1
Ubr4A2AN08 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Gm9728-201ENSMUST00000200197 1055 ntBASIC8.21□□□□□ -1.1
Ubr4A2AN08 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ubr4A2AN08 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC8.2□□□□□ -1.1
Ubr4A2AN08 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC8.2□□□□□ -1.1
Ubr4A2AN08 AC159006.1-201ENSMUST00000226396 258 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Gm14723-201ENSMUST00000118686 215 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 D9Wsu149-201ENSMUST00000214169 594 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 AC154276.1-201ENSMUST00000228874 1299 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Gm10154-201ENSMUST00000084445 354 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Gm23931-201ENSMUST00000103842 109 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Gm12997-201ENSMUST00000120207 640 ntBASIC8.2□□□□□ -1.1
Ubr4A2AN08 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ubr4A2AN08 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms