Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Rprl3-201ENSMUST00000157400 290 ntBASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
1700028J19RikA0A0U1RP08 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Olfr129-201ENSMUST00000122318 993 ntBASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
1700028J19RikA0A0U1RP08 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Mir3081-201ENSMUST00000175305 84 ntBASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm27742-201ENSMUST00000184667 60 ntBASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
1700028J19RikA0A0U1RP08 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.78□□□□□ -0.04
1700028J19RikA0A0U1RP08 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
1700028J19RikA0A0U1RP08 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms