Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Gm2274-201ENSMUST00000184539 609 ntBASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav19A0A0B4J1K4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Gm7213-201ENSMUST00000215977 950 ntBASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav19A0A0B4J1K4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Gm10653-202ENSMUST00000139570 835 ntBASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav19A0A0B4J1K4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Trav19A0A0B4J1K4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms