Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm7370-201ENSMUST00000219471 767 ntBASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav6d-5A0A075B6B9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.73□□□□□ -0.37
Trav6d-5A0A075B6B9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm6257-201ENSMUST00000163864 910 ntBASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc35b2-207ENSMUST00000226086 850 ntBASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6d-5A0A075B6B9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6d-5A0A075B6B9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms