Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6-5A0A075B6B5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Gm18421-201ENSMUST00000204122 625 ntBASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav6-5A0A075B6B5 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav6-5A0A075B6B5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Gm7791-201ENSMUST00000219066 539 ntBASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav6-5A0A075B6B5 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav6-5A0A075B6B5 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms