Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-3A0A075B6A4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm6365-201ENSMUST00000054711 744 ntBASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-3A0A075B6A4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.78□□□□□ -0.52
Trav12d-3A0A075B6A4 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav12d-3A0A075B6A4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm10517-202ENSMUST00000192970 758 ntBASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm36967-201ENSMUST00000193814 266 ntBASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav12d-3A0A075B6A4 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms