Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm10812-201ENSMUST00000099864 546 ntBASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Sybu-209ENSMUST00000228639 4113 ntBASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4-4-dv10A0A075B651 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4-4-dv10A0A075B651 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav4-4-dv10A0A075B651 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav4-4-dv10A0A075B651 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav4-4-dv10A0A075B651 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms