Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Mir1199-201ENSMUST00000117015 119 ntBASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav16nA0A075B634 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav16nA0A075B634 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Gm12527-201ENSMUST00000117967 564 ntBASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Gm11539-201ENSMUST00000119837 557 ntBASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav16nA0A075B634 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav16nA0A075B634 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav16nA0A075B634 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms