Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm10566-201ENSMUST00000086739 996 ntBASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm26039-201ENSMUST00000158152 144 ntBASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm5417-201ENSMUST00000079706 384 ntBASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Gm10812-201ENSMUST00000099864 546 ntBASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav15d-1-dv6d-1A0A075B624 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms