Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Slc35b2-202ENSMUST00000223987 1766 ntBASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13d-1A0A075B606 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13d-1A0A075B606 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav13d-1A0A075B606 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav13d-1A0A075B606 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms