Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm5417-201ENSMUST00000079706 384 ntBASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav6-1A0A075B5Z8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6-1A0A075B5Z8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6-1A0A075B5Z8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6-1A0A075B5Z8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6-1A0A075B5Z8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms