Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav5-1A0A075B5Z7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav5-1A0A075B5Z7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav5-1A0A075B5Z7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms