Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Sybu-209ENSMUST00000228639 4113 ntBASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
H2afb3S4R1G7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
H2afb3S4R1G7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
H2afb3S4R1G7 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
H2afb3S4R1G7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms