Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn5Q9WVD4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Gm14701-201ENSMUST00000117156 348 ntBASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn5Q9WVD4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Gm4459-201ENSMUST00000118750 468 ntBASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn5Q9WVD4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn5Q9WVD4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn5Q9WVD4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn5Q9WVD4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn5Q9WVD4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.27■□□□□ 0.19
Clcn5Q9WVD4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn5Q9WVD4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.27■□□□□ 0.19
Clcn5Q9WVD4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn5Q9WVD4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms