Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Asic1-205ENSMUST00000228185 1818 ntBASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ClcnkaQ9WUB7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ClcnkaQ9WUB7 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ClcnkaQ9WUB7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Gm7367-201ENSMUST00000057611 492 ntBASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ClcnkaQ9WUB7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Mir3081-201ENSMUST00000175305 84 ntBASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ClcnkaQ9WUB7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms