Protein–RNA interactions for Protein: Q9WU00

Nrf1, Nuclear respiratory factor 1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrf1Q9WU00 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.24■□□□□ 0.03
Nrf1Q9WU00 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nrf1Q9WU00 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nrf1Q9WU00 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm13186-201ENSMUST00000118031 316 ntBASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm15565-201ENSMUST00000118890 427 ntBASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm27463-201ENSMUST00000183569 57 ntBASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nrf1Q9WU00 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nrf1Q9WU00 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms