Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Htra1Q9R118 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Htra1Q9R118 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Htra1Q9R118 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Htra1Q9R118 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Htra1Q9R118 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Htra1Q9R118 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.66□□□□□ -0.06
Htra1Q9R118 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Htra1Q9R118 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Htra1Q9R118 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.66□□□□□ -0.06
Htra1Q9R118 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Htra1Q9R118 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Htra1Q9R118 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Htra1Q9R118 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Htra1Q9R118 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.65□□□□□ -0.06
Htra1Q9R118 Gm11539-201ENSMUST00000119837 557 ntBASIC14.65□□□□□ -0.06
Htra1Q9R118 Gm13436-201ENSMUST00000120418 567 ntBASIC14.65□□□□□ -0.06
Htra1Q9R118 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Htra1Q9R118 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Htra1Q9R118 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Htra1Q9R118 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Gm13559-201ENSMUST00000120476 863 ntBASIC14.64□□□□□ -0.07
Htra1Q9R118 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.64□□□□□ -0.07
Htra1Q9R118 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.64□□□□□ -0.07
Htra1Q9R118 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Htra1Q9R118 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Htra1Q9R118 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Htra1Q9R118 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Htra1Q9R118 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Htra1Q9R118 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Htra1Q9R118 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.63□□□□□ -0.07
Htra1Q9R118 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.63□□□□□ -0.07
Htra1Q9R118 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Htra1Q9R118 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Htra1Q9R118 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Htra1Q9R118 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Htra1Q9R118 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Htra1Q9R118 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms