Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Scn11aQ9R053 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn11aQ9R053 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn11aQ9R053 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn11aQ9R053 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.55■□□□□ 0.56
Scn11aQ9R053 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.55■□□□□ 0.56
Scn11aQ9R053 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.55■□□□□ 0.56
Scn11aQ9R053 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn11aQ9R053 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.54■□□□□ 0.56
Scn11aQ9R053 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Scn11aQ9R053 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.53■□□□□ 0.56
Scn11aQ9R053 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Scn11aQ9R053 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Scn11aQ9R053 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.52■□□□□ 0.56
Scn11aQ9R053 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.52■□□□□ 0.56
Scn11aQ9R053 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Scn11aQ9R053 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Scn11aQ9R053 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.52■□□□□ 0.56
Scn11aQ9R053 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Scn11aQ9R053 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Scn11aQ9R053 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn11aQ9R053 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Scn11aQ9R053 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.52■□□□□ 0.55
Scn11aQ9R053 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Scn11aQ9R053 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms