Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Gm23547-201ENSMUST00000158210 271 ntBASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Scn5aQ9JJV9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Gm10154-201ENSMUST00000084445 354 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Gm8318-201ENSMUST00000182954 872 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Scn5aQ9JJV9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Mir7023-201ENSMUST00000185093 64 ntBASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Scn5aQ9JJV9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Gm38294-201ENSMUST00000192831 381 ntBASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Gm12428-201ENSMUST00000119844 727 ntBASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Scn5aQ9JJV9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms