Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smco4Q9JIS3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Gm13146-201ENSMUST00000118508 780 ntBASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Gm45102-201ENSMUST00000207427 857 ntBASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smco4Q9JIS3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Gm9988-201ENSMUST00000069786 435 ntBASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smco4Q9JIS3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.71□□□□□ -0.37
Smco4Q9JIS3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms