Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ube4bQ9ES00 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Gm12382-201ENSMUST00000122005 922 ntBASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Gm37292-201ENSMUST00000192062 758 ntBASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4bQ9ES00 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube4bQ9ES00 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ube4bQ9ES00 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ube4bQ9ES00 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ube4bQ9ES00 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Ube4bQ9ES00 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Gm5643-201ENSMUST00000117081 966 ntBASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.2■□□□□ 0.02
Ube4bQ9ES00 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Ube4bQ9ES00 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ube4bQ9ES00 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms