Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.17□□□□□ -0.14
Ssr3Q9DCF9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ssr3Q9DCF9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ssr3Q9DCF9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ssr3Q9DCF9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Ssr3Q9DCF9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Gm7638-201ENSMUST00000121348 967 ntBASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.14□□□□□ -0.15
Ssr3Q9DCF9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr3Q9DCF9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ssr3Q9DCF9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ssr3Q9DCF9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ssr3Q9DCF9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms