Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Gm7213-201ENSMUST00000215977 950 ntBASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Gm10566-201ENSMUST00000086739 996 ntBASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.33■□□□□ 0.04
Sh2d4aQ9D7V1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sh2d4aQ9D7V1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Gm30025-201ENSMUST00000218555 728 ntBASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sh2d4aQ9D7V1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.3■□□□□ 0.04
Sh2d4aQ9D7V1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d4aQ9D7V1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms