Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC19.78■□□□□ 0.76
Chmp5Q9D7S9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Gm37055-201ENSMUST00000191866 133 ntBASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Chmp5Q9D7S9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp5Q9D7S9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp5Q9D7S9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp5Q9D7S9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp5Q9D7S9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Mir5130-201ENSMUST00000175160 84 ntBASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Gm27011-201ENSMUST00000182352 972 ntBASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chmp5Q9D7S9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp5Q9D7S9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp5Q9D7S9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms