Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Tmem54Q9D7S1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tmem54Q9D7S1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44357-201ENSMUST00000195897 142 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm19658-201ENSMUST00000196231 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44367-201ENSMUST00000196836 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44350-201ENSMUST00000197197 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44390-201ENSMUST00000197533 144 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44313-201ENSMUST00000198018 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44486-201ENSMUST00000198508 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44314-201ENSMUST00000199263 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44394-201ENSMUST00000199558 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44484-201ENSMUST00000199873 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44466-201ENSMUST00000200264 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Gm44359-201ENSMUST00000200671 138 ntBASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tmem54Q9D7S1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tmem54Q9D7S1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tmem54Q9D7S1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tmem54Q9D7S1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tmem54Q9D7S1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms