Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim42Q9D2H5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim42Q9D2H5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim42Q9D2H5 Phf7-203ENSMUST00000226565 1971 ntBASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Trmt13-210ENSMUST00000198454 880 ntBASIC15.78■□□□□ 0.12
Trim42Q9D2H5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim42Q9D2H5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms