Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Gm26461-201ENSMUST00000175064 290 ntBASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Gm18624-201ENSMUST00000220966 658 ntBASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lysmd1Q9D0E3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Lysmd1Q9D0E3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Lysmd1Q9D0E3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Lysmd1Q9D0E3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gm16570-201ENSMUST00000161951 436 ntBASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lysmd1Q9D0E3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lysmd1Q9D0E3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Gm10499-201ENSMUST00000174094 934 ntBASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lysmd1Q9D0E3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lysmd1Q9D0E3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms