Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.15■□□□□ 0.34
Ssr1Q9CY50 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ssr1Q9CY50 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Ssr1Q9CY50 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.14■□□□□ 0.34
Ssr1Q9CY50 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ssr1Q9CY50 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ssr1Q9CY50 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Gm21559-201ENSMUST00000220638 855 ntBASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Gm8587-201ENSMUST00000076538 843 ntBASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ssr1Q9CY50 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Gm18101-201ENSMUST00000215769 548 ntBASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ssr1Q9CY50 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.11■□□□□ 0.33
Ssr1Q9CY50 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Gm37722-201ENSMUST00000193757 208 ntBASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ssr1Q9CY50 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms