Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm10293-201ENSMUST00000076317 1002 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm6316-201ENSMUST00000082064 1020 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm37519-201ENSMUST00000191687 2210 ntBASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Sec61bQ9CQS8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm6858-201ENSMUST00000208582 1468 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm13036-201ENSMUST00000117799 748 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm8344-201ENSMUST00000119813 856 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm11780-201ENSMUST00000136880 516 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm8349-201ENSMUST00000182720 1003 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm40332-201ENSMUST00000199847 938 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Sec61bQ9CQS8 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Sec61bQ9CQS8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Gm11764-201ENSMUST00000120221 623 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Gm9727-201ENSMUST00000161387 555 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Gm24513-201ENSMUST00000174964 138 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 CT943659.1-201ENSMUST00000215459 326 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 AC154222.1-201ENSMUST00000223882 475 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sec61bQ9CQS8 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms