Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gtf2ird2Q99NI3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Gtf2ird2Q99NI3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gtf2ird2Q99NI3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gtf2ird2Q99NI3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gtf2ird2Q99NI3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Gm13418-201ENSMUST00000119097 944 ntBASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gtf2ird2Q99NI3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms