Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gm13223-201ENSMUST00000118609 747 ntBASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gm10253-201ENSMUST00000194270 940 ntBASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Col25a1Q99MQ5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Gm27306-201ENSMUST00000183970 107 ntBASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col25a1Q99MQ5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col25a1Q99MQ5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Gm27646-201ENSMUST00000183989 110 ntBASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Gm45747-201ENSMUST00000212203 999 ntBASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col25a1Q99MQ5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col25a1Q99MQ5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms