Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Gm15427-201ENSMUST00000117288 531 ntBASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Haglr-201ENSMUST00000100000 2085 ntBASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Smarcd2Q99JR8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gm44872-201ENSMUST00000207864 420 ntBASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smarcd2Q99JR8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Gm45612-201ENSMUST00000211320 160 ntBASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Smarcd2Q99JR8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Gm13216-201ENSMUST00000117145 591 ntBASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smarcd2Q99JR8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms