Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Gm4899-201ENSMUST00000178708 719 ntBASIC18.59■□□□□ 0.57
Col20a1Q923P0 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.59■□□□□ 0.57
Col20a1Q923P0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col20a1Q923P0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.58■□□□□ 0.57
Col20a1Q923P0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col20a1Q923P0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col20a1Q923P0 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.58■□□□□ 0.56
Col20a1Q923P0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.57■□□□□ 0.56
Col20a1Q923P0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.57■□□□□ 0.56
Col20a1Q923P0 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.57■□□□□ 0.56
Col20a1Q923P0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col20a1Q923P0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Gm27300-201ENSMUST00000184085 97 ntBASIC18.56■□□□□ 0.56
Col20a1Q923P0 Gm27335-201ENSMUST00000184758 97 ntBASIC18.56■□□□□ 0.56
Col20a1Q923P0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col20a1Q923P0 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.55■□□□□ 0.56
Col20a1Q923P0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col20a1Q923P0 Mir8117-201ENSMUST00000184773 107 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms