Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Gm44335-201ENSMUST00000196879 141 ntBASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Gm44297-201ENSMUST00000198304 141 ntBASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Gm44346-201ENSMUST00000198851 141 ntBASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.89■□□□□ 0.61
Sf3b3Q921M3 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b3Q921M3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Gm11745-201ENSMUST00000121669 448 ntBASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.88■□□□□ 0.61
Sf3b3Q921M3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b3Q921M3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Gm5312-201ENSMUST00000203728 547 ntBASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b3Q921M3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Gm9385-201ENSMUST00000117563 472 ntBASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b3Q921M3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Gm16198-201ENSMUST00000118766 670 ntBASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Mir6956-201ENSMUST00000183598 62 ntBASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Gm2272-201ENSMUST00000194903 582 ntBASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b3Q921M3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b3Q921M3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms