Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Gm6550-201ENSMUST00000187574 993 ntBASIC18.19■□□□□ 0.5
Smc1bQ920F6 Gm7506-201ENSMUST00000207758 815 ntBASIC18.19■□□□□ 0.5
Smc1bQ920F6 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc1bQ920F6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Smc1bQ920F6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc1bQ920F6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.17■□□□□ 0.5
Smc1bQ920F6 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.17■□□□□ 0.5
Smc1bQ920F6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc1bQ920F6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Gm13036-201ENSMUST00000117799 748 ntBASIC18.16■□□□□ 0.5
Smc1bQ920F6 Gm27628-201ENSMUST00000184911 107 ntBASIC18.16■□□□□ 0.5
Smc1bQ920F6 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.16■□□□□ 0.5
Smc1bQ920F6 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.16■□□□□ 0.5
Smc1bQ920F6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.16■□□□□ 0.5
Smc1bQ920F6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smc1bQ920F6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smc1bQ920F6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Smc1bQ920F6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms