Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Gm45058-201ENSMUST00000205810 766 ntBASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Gm9731-201ENSMUST00000209480 747 ntBASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Pcdhb3Q91XZ7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb3Q91XZ7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Phf7-203ENSMUST00000226565 1971 ntBASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Gm2274-201ENSMUST00000184539 609 ntBASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb3Q91XZ7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb3Q91XZ7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms