Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Pcdhga9Q91XX9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdhga9Q91XX9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga9Q91XX9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga9Q91XX9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga9Q91XX9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga9Q91XX9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdhga9Q91XX9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdhga9Q91XX9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhga9Q91XX9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga9Q91XX9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms