Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhgb4Q91XX6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhgb4Q91XX6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhgb4Q91XX6 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhgb4Q91XX6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhgb4Q91XX6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhgb4Q91XX6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhgb4Q91XX6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms