Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.03■□□□□ 0.48
Trex1Q91XB0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trex1Q91XB0 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.03■□□□□ 0.48
Trex1Q91XB0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trex1Q91XB0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trex1Q91XB0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trex1Q91XB0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trex1Q91XB0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trex1Q91XB0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.01■□□□□ 0.47
Trex1Q91XB0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trex1Q91XB0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trex1Q91XB0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trex1Q91XB0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18■□□□□ 0.47
Trex1Q91XB0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18■□□□□ 0.47
Trex1Q91XB0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Trex1Q91XB0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trex1Q91XB0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trex1Q91XB0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.99■□□□□ 0.47
Trex1Q91XB0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.99■□□□□ 0.47
Trex1Q91XB0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.99■□□□□ 0.47
Trex1Q91XB0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trex1Q91XB0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms