Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.75■□□□□ 0.27
TraipQ8VIG6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.75■□□□□ 0.27
TraipQ8VIG6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.75■□□□□ 0.27
TraipQ8VIG6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.74■□□□□ 0.27
TraipQ8VIG6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TraipQ8VIG6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Gm11594-201ENSMUST00000122313 162 ntBASIC16.73■□□□□ 0.27
TraipQ8VIG6 Mir3113-201ENSMUST00000175478 76 ntBASIC16.73■□□□□ 0.27
TraipQ8VIG6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.73■□□□□ 0.27
TraipQ8VIG6 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.73■□□□□ 0.27
TraipQ8VIG6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.73■□□□□ 0.27
TraipQ8VIG6 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.73■□□□□ 0.27
TraipQ8VIG6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TraipQ8VIG6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.72■□□□□ 0.27
TraipQ8VIG6 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.72■□□□□ 0.27
TraipQ8VIG6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
TraipQ8VIG6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TraipQ8VIG6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TraipQ8VIG6 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms